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Daly, Reb Anne, Roux, S., Borton, Kayla Ann, Morgan, D. M., Johnston, M. D., Booker, A. E., Hoyt, D. W., Meulia, T., Wolfe, R. A., Hanson, Andrea, Mouser, P. J., Sullivan, M. B., Wrighton, Kelly Catherine, Wilkins, Mike James, (2019) Viruses control dominant bacteria colonizing the terrestrial deep biosphere after hydraulic fracturing Nature Microbiology 4 352–361
Daly, Reb Anne, Wrighton, Kelly Catherine, Wilkins, Mike James, (2018) "Characterizing the Deep Terrestrial Subsurface Microbiome" Humana Press, New York, NY 1--15
Borton, Kayla Ann, Daly, Reb Anne, O'Banion, Bridget, Hoyt, David W, Marcus, Daniel N, Welch, Susan, Hastings, Sybille S, Meulia, Tea, Wolfe, Richard Alan, Booker, Anne E, others, , (2018) Comparative genomics and physiology of the genus Methanohalophilus, a prevalent methanogen in hydraulically fractured shale Environmental microbiology
Borton, Kayla Ann, Hoyt, David W, Roux, Simon, Daly, Reb Anne, Welch, Susan A, Nicora, Carrie D, Purvine, Samuel, Eder, Elizabeth K, Hanson, Andrea, Sheets, Julie M, others, , (2018) Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales Proceedings of the National Academy of Sciences 115 28 E6585--E6594
Borton, Kayla Ann, Hoyt, David W, Roux, Simon, Daly, Reb Anne, Welch, Susan A, Nicora, Carrie D, Purvine, Samuel, Eder, Elizabeth K, Hanson, Andrea, Sheets, Julie M, others, , (2018) Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales Proceedings of the National Academy of Sciences 115 28 E6585--E6594
Tummings, Shantal, Panescu, Jenny, Daly, Reb Anne, Wrighton, Kelly Catherine, Mouser, Paula J, (2018) Draft Genome Sequences of Marinobacter Strains Recovered from Utica Shale-Produced Fluids Genome announcements 6 14 e00155--18
Panescu, Jenny, Daly, Reb Anne, Wrighton, Kelly Catherine, Mouser, Paula J, (2018) Draft Genome Sequences of Two Chemosynthetic Arcobacter Strains Isolated from Hydraulically Fractured Wells in Marcellus and Utica Shales Genome announcements 6 20 e00159--18
Solden, Lindsey M, Naas, Adrian E, Roux, Simon, Daly, Reb Anne, Collins, William B, Nicora, Carrie D, Purvine, Sam O, Hoyt, David W, Sch\"uckel, Julia, , J\orgensen, Bodil, , others, , (2018) Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem Nature Microbiology 3 11 1274
Evans, Morgan Volker, Panescu, Jenny, Hanson, Andrea, Welch, Susan A, Sheets, Julia M, Nastasi, Nicholas, Daly, Reb Anne, Cole, David Robert, Darrah, Thomas H, Wilkins, Mike James, others, , (2018) Members of Marinobacter and Arcobacter influence biogeochemistry during early production of hydraulically fractured shale gas wells in the Appalachian Basin Frontiers in Microbiology 9 2646
Borton, Kayla Ann, Sabag-Daigle, Anice, Wu, Jikang, Solden, Lindsey M, O’Banion, Bridget S, Daly, Reb Anne, Wolfe, Richard Alan, Gonzalez, Juan F, Wysocki, Vicki H, Ahmer, Brian MM, others, , (2017) Chemical and pathogen-induced inflammation disrupt the murine intestinal microbiome Microbiome 5 1 47
Booker, Anne E, Johnston, Michael D, Daly, Reb Anne, Wrighton, Kelly Catherine, Wilkins, Mike James, (2017) Draft Genome Sequences of Multiple Frackibacter Strains Isolated from Hydraulically Fractured Shale Environments Genome announcements 5 32 e00608--17
Narrowe, Adrienne B, Angle, Jordan C, Daly, Reb Anne, Stefanik, Kay C, Wrighton, Kelly Catherine, Miller, Christopher S, (2017) High-resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils Environmental microbiology 19 6 2192--2209
Angle, Jordan C, Morin, Timothy H, Solden, Lindsey M, Narrowe, Adrienne B, Smith, Garrett Joseph, Borton, Kayla Ann, Rey-Sanchez, Camilo, Daly, Reb Anne, Mirfenderesgi, Golnazalsdat, Hoyt, David W, others, , (2017) Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions Nature Communications 8 1 1567
Solden, Lindsey M, Hoyt, David W, Collins, William B, Plank, Johanna E, Daly, Reb Anne, Hildebrand, Erik, Beavers, Timothy J, Wolfe, Richard Alan, Nicora, Carrie D, Purvine, Sam O, others, , (2017) New roles in hemicellulosic sugar fermentation for the uncultivated Bacteroidetes family BS11 The ISME journal 11 3 691
Booker, Anne Elizabeth, Borton, Kayla Ann, Daly, Reb Anne, Nicora, Carrie, Welch, Sue, Dusane, Devendra, Johnston, Michael, Sharma, Shikha, Mouser, Paula J, Cole, David R, others, , (2017) "Potential Repercussions Associated with Halanaerobium Colonization of Hydraulically Fractured Shales (226730)"
Booker, Anne E, Borton, Kayla Ann, Daly, Reb Anne, Welch, Susan A, Nicora, Carrie D, Hoyt, David W, Wilson, Travis, Purvine, Samuel O, Wolfe, Richard Alan, Sharma, Shikha, others, , (2017) Sulfide generation by dominant Halanaerobium microorganisms in hydraulically fractured shales mSphere 2 4 e00257--17
Booker, Anne E, Borton, Kayla Ann, Daly, Reb Anne, Welch, Susan A, Nicora, Carrie D, Hoyt, David W, Wilson, Travis, Purvine, Samuel O, Wolfe, Richard Alan, Sharma, Shikha, others, , (2017) Sulfide generation by dominant Halanaerobium microorganisms in hydraulically fractured shales mSphere 2 4 e00257--17
Borton, Kayla Ann, Daly, Reb Anne, Morgan, David M, Booker, Anne E, Hoyt, David W, Mouser, Paula J, Sharma, Shikha, Wilkins, Mike James, Wrighton, Kelly Catherine, (2016) "Methanohalophilus is the Dominant Source of Biogenic Methane in Hydraulically Fractured Shales"
Daly, Reb Anne, Borton, Kayla Ann, Wilkins, Mike James, Hoyt, David W, Kountz, Duncan J, Wolfe, Richard Alan, Welch, Susan A, Marcus, Daniel N, Trexler, Ryan V, MacRae, Jean D, others, , (2016) Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales Nature microbiology 1 10 16146
Daly, Reb Anne, Borton, Kayla Ann, Wilkins, Mike James, Hoyt, David W, Kountz, Duncan J, Wolfe, Richard Alan, Welch, Susan A, Marcus, Daniel N, Trexler, Ryan V, MacRae, Jean D, others, , (2016) Microbial metabolisms in a 2.5-km-deep ecosystem created by hydraulic fracturing in shales Nature microbiology 1 10 16146
Evert, Mary, Panescu, Jenny, Daly, Reb Anne, Welch, Susan A, Hespen, Jessica, Sharma, Shikha, Cole, David R, Darrah, Thomas H, Wilkins, Mike James, Wrighton, Kelly Catherine, others, , (2016) "Temporal Changes in Fluid Biogeochemistry and Microbial Cell Abundance after Hydraulic Fracturing in Marcellus Shale"
Wilkins, Mike James, Daly, Reb Anne, Mouser, Paula J, Trexler, Ryan, Wrighton, Kelly Catherine, Sharma, Shikha, Cole, David R, Biddle, Jennifer F, Denis, Elizabeth, Fredrickson, Jim K, others, , (2014) Trends and future challenges in sampling the deep terrestrial biosphere Frontiers in microbiology 5 481
Wrighton, Kelly Catherine, Virdis, Bernardino, Clauwaert, Peter, Read, Suzanne T, Daly, Reb Anne, Boon, Nico, Piceno, Yvette, Andersen, Gary L, Coates, John D, Rabaey, Korneel, (2010) Bacterial community structure corresponds to performance during cathodic nitrate reduction The ISME journal 4 11 1443
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