Publications 2023 Thompson HJ, Lutsiv L. (2023) Natural Products in Precision Oncology: Plant-Based Small Molecule Inhibitors of Protein Kinases for Cancer Chemoprevention. Nutrients 2023, 15(5), 1192; https://doi.org/10.3390/nu15051192 Lutsiv T, McGinley JN, Neil ES, Foster MT, Thompson HJ. (2023) Thwarting Metabolic Dysfunction-Associated Fatty Liver Disease (MAFLD) with Common Bean: Dose- and Sex-Dependent Protection against Hepatic Steatosis. Nutrients 2023, 15(3), 526; doi:10.3390/nu15030526 2022 Brick MA, Kleintop A, Echeverria D, Kammlade S, Brick LA, Osorno JM, McClean P, Thompson HJ. (2022) Dry Bean: A Protein-Rich Superfood With Carbohydrate Characteristics That Can Close the Dietary Fiber Gap. Front Plant Sci. 2022 Jul 26;13:914412.doi: 10.3389/fpls.2022.914412. Didinger C, Thompson HJ (2022) The role of pulses in improving human health: A review. Legume Science. 14 May 2022 https://doi.org/10.1002/leg3.147 Lutsiv T, McGinley JN, Neil-McDonald ES, Weir TL, Foster MT, Thompson HJ. (2022) Relandscaping the Gut Microbiota with a Whole Food: Dose–Response Effects to Common Bean. Foods 2022, 11(8), 1153; https://doi.org/10.3390/foods11081153 2021 Lutsiv T, Weir TL, McGinley JN, Neil ES, Wei Y, Thompson HJ. (2021) Compositional Changes of the High-Fat Diet-Induced Gut Microbiota upon Consumption of Common Pulses. Nutrients Nov 9;13(11):3992.doi: 10.3390/nu13113992. Thompson HJ. (2021) The Dietary Guidelines for Americans (2020-2025): Pulses, Dietary Fiber, and Chronic Disease Risk-A Call for Clarity and Action. Nutrients Nov 12;13(11):4034. doi: 10.3390/nu13114034. Weir TL, Trikha SRJ, Thompson HJ. (2021) Diet and cancer risk reduction: The role of diet-microbiota interactions and microbial metabolites. Semin Cancer Biol, 70, 53-60, doi:10.1016/j.semcancer.2020.06.007. Thompson HJ, Levitt JO, McGinley JN, Chandler P, Guenther PM, Huybrechts I, Playdon MC. (2021) Measuring Dietary Botanical Diversity as a Proxy for Phytochemical Exposure. Nutrients, 13, doi:10.3390/nu13041295. Thompson HJ. (2021) Micronutrients and the Immune System: Some Is Good but We Need to Know More. Nutrients, 13, doi:10.3390/nu13020285. Kan Z, Wang Y, Chen Q, Tang X, Thompson HJ. (2021) Huang, J.; Zhang, J.; Gao, F.; Shen, Y.; Wan, X. Green Tea Suppresses Amyloid beta Levels and Alleviates Cognitive Impairment by Inhibiting APP Cleavage and Preventing Neurotoxicity in 5XFAD Mice. Mol Nutr Food Res, 65, e2100626, doi:10.1002/mnfr.202100626. Johnson SA, Prenni JE, Heuberger AL, Isweiri H, Chaparro JM, Newman SE, Uchanski ME, Omerigic HM, Michell KA, Bunning M, Foster MT, Thompson HJ, Weir TL. (2021) Comprehensive Evaluation of Metabolites and Minerals in 6 Microgreen Species and the Influence of Maturity. Curr Dev Nutr, 5, nzaa180, doi:10.1093/cdn/nzaa180. Didinger C, Thompson HJ. (2021) Defining Nutritional and Functional Niches of Legumes: A Call for Clarity to Distinguish a Future Role for Pulses in the Dietary Guidelines for Americans. Nutrients, 13, doi:10.3390/nu13041100. 2020 Didinger C, Thompson H. 2020 Motivating Pulse-Centric Eating Patterns to Benefit Human and Environmental Well-Being. Nutrients 2020, 12(11), 3500; https://doi.org/10.3390/nu12113500 Weir TL, McGinley JN, Neil ES, Thompson HJ. 2020 Effect of Pulse Consumption on Obesity and the Metagenome. Proceedings 2020, 61(1), 23; https://doi.org/10.3390/IECN2020-07009 Thomspon HJ, McGinley, JN, Neil ES, Weir TL. 2020 Effect of Common Bean Consumption on the Gut Associated Microbiome in an In Vivo Screening Model for Breast Cancer. Proceedings 2020, 61(1), 14; https://doi.org/10.3390/IECN2020-07008 Thompson HJ. (2020) It Is Really Simple: Foods and Human Health, The Whole Story Nutrients. Jul 16;12(7):2102. doi: 10.3390/nu12072102 Weir TL, Raj S, Trikha J, Thompson HJ. (2020) Diet and Cancer Risk Reduction: The Role of Diet-Microbiota Interactions and Microbial Metabolites. Seminars in Cancer Biology https://doi.org/10.1016/j.semcancer.2020.06.007 Michell KA, Isweiri H, Newman SE, Bunning M, Bellows LL, Dinges MM, Grabos LE, Rao S, Foster MT, Heuberger AL, Prenni JE, Thompson HJ, Uchanski ME, Weir TL, Johnson SA. (2020), Microgreens: Consumer sensory perception and acceptance of an emerging functional food crop. Journal of Food Science. doi:10.1111/1750-3841.15075 McGinley JN, Fitzgerald VK, Neil ES, Omerigic HM, Heuberger AL, Weir TL, McGee R, Vandemark G, Thompson HJ. (2020) Pulse Crop Effects on Gut Microbial Populations, Intestinal Function, and Adiposity in a Mouse Model of Diet-Induced Obesity. Nutrients 12(3), 593; https://doi.org/10.3390/nu12030593 2019 Thompson HJ (2019) Dietary Bean Consumption and Human Health. Nutrients 11(12), 3074 https://doi.org/10.3390/nu11123074 Neil ES, McGinley JN, Fitzgerald VK, Lauck CA, Tabke JA, Streeter-McDonald MR, Yao L, Broeckling CD, Weir TL, Foster MT, Thompson HJ. (2019) White Kidney Bean (Phaseolus Vulgaris L.) Consumption Reduces Fat Accumulation in a Polygenic Mouse Model of Obesity. Nutrients 11(11), 2780; https://doi.org/10.3390/nu11112780 Myers JR, Wallace LT, Mafi Moghaddam S, Kleintop AE, Echeverria D, Thompson HJ, Brick MA, Lee R, McClean PE. (2019) Improving the Health Benefits of Snap Bean: Genome-Wide Association Studies of Total Phenolic Content. Nutrients. Oct 18;11(10). pii: E2509. doi:10.3390/nu11102509. Wang Y, Kan Z, Wan X, McGinley JN, Thompson HJ. (2019) Differences in chemical composition predictive of in vitro biological activity among commercially important cultivars of genus Camellia. Food Chemistry, Available online 6 June 2019. https://doi.org/10.1016/j.foodchem.2019.06.017 2018 Wang Y, Kan Z, Wang D, Zhang L, Wan X, McGinley JN, Thompson HJ. (2018) Differences in chemical composition among commercially important cultivars of Genus Camellia. J Agric Food Chem. Dec 21. doi: 10.1021/acs.jafc.8b06164. [Epub ahead of print] Wang Y, Kan Z, Thompson HJ, Ling T, Ho CT, Li D, Wan X. J. (2018) Impact of Six Typical Processing Methods on the Chemical Composition of Tea Leaves Using a Single Camellia sinensis Cultivar, Longjing 43. Agric Food Chem. Nov 26. doi: 10.1021/acs.jafc.8b05140. [Epub ahead of print Moghaddam SM, Brick MA, Echeverria D, Thompson HJ, Brick LA, Lee R, Mamidi S, McClean PE. (2018) Genetic Architecture of Dietary Fiber and Oligosaccharide Content in a Middle American Panel of Edible Dry Bean. Plant Genome. Mar;11(1). doi: 10.3835/plantgenome2017.08.0074. 2017 Thompson HJ, McGinley JN, Neil ES, Brick MA. (2017) Beneficial Effects of Common Bean on Adiposity and Lipid Metabolism. Nutrients, 9(9), 998; doi:10.3390/nu9090998 Hooper S, Wiesinger JA, Echeverria D, Thompson HJ, Brick MA, Nchimbi-Msolla S, Cichy KA. (2017) Carbohydrate Profile of a Dry Bean (Phaseolus vulgaris L.) Panel Encompassing Broad Genetic Variability for Cooking Time. Cereal Chemistry Journal, Jan/Feb, 94 (1), 135. 2016 Chen Y, McGee R, Vandemark G, Brick M, Thompson HJ. (2016) Dietary Fiber Analysis of Four Pulses Using AOAC 2011.25: Implications for Human Health. Nutrients. Dec 21;8(12). pii: E829. doi: 10.3390/nu8120829. Wiesinger JA, Cichy KA, Glahn RP, Grusak MA, Brick MA, Thompson HJ, Tako E. (2016) Demonstrating a Nutritional Advantage to the Fast Cooking Dry Bean (Phaseolus vulgaris L.). J Agric Food Chem. Oct 18. [Epub ahead of print] Thompson HJ, Brick MA.Adv Nutr. (2016) Perspective: Closing the Dietary Fiber Gap: An Ancient Solution for a 21st Century Problem. Jul 15;7(4):623-6. doi: 10.3945/an.115.009696. Wallner BK, Thompson HJ. (2016) Training professionals to engage agriculture as an instrument of public health. Public Health. Jun 25. pii: S0033-3506(16)30092-0. [Epub ahead of print] Wang Y, Yang Y, Wei C, Wan X, Thompson HJ. (2016) Principles of Biomedical Agriculture Applied to the Plant Family Theaceae To Identify Novel Interventions for Cancer Prevention and Control. J Agric Food Chem. Mar 30. [Epub ahead of print] Kleintop AE, Myers JR, Echeverria D, Thompson HJ, Brick MA. (2016) Total Phenolic Content and Associated Phenotypic Traits in a Diverse Collection of Snap Bean Cultivars. J. Amer. Soc. Hort. Sci. 141(1):3–11. 2013 Kleintop AE, Echeverria D, Brick LA, Thompson HJ, Brick MA. (2013) Adaptation of the AOAC 2011.25 Integrated Total Dietary Fiber Assay to Determine Dietary Fiber and Oligosaccharide Content of Dry Edible Bean. J Agric Food Chem. Sep 5. [Epub ahead of print] Santra M, Matthews SB, Thompson HJ. (2013) Development of a core collection of Triticum and Aegilops species for improvement of wheat for activity against chronic diseases. Agriculture & Food Security, 2(4) 2012 Matthews SB, Santra M, Mensack MM, Wolfe P, Byrne PF, Thompson HJ. (2012) Metabolite Profiling of a Diverse Collection of Wheat Lines Using Ultraperformance Liquid Chromatography Coupled with Time-of-Flight Mass Spectrometry. PLoS One. 7(8):e44179. Epub 2012 Aug 30. Mensack M, McGinley JN, Thompson HJ. (2012) Metabolomic analysis of the effects of edible dry beans. (Phaseolus vulgaris L.) on tissue lipid metabolism and carcinogenesis in rats. Br J Nutr. Aug;108 Suppl 3:S155–S165 Zhu Z, Jiang W, Thompson HJ (2012) Edible dry bean consumption (Phaseolus vulgaris L.) modulates cardiovascular risk factors and diet-induced obesity in rats and mice. Br J Nutr. Aug;108 Suppl 3:S66–S73 Daniell E, Ryan P, Brick M, Thompson HJ. (2012) Dietary dry bean effects on hepatic expression of stress and toxicity-related gene in rats. Br J Nutr. Aug;108 Suppl 3:S37–S45 Thompson MD, Thompson HJ. (2012) Physiological effects of bean (Phaseolus vulgaris L.) consumption on cellular signaling in cancer. Cell Cycle 11:5, 1-2 2011 Thompson MD, Mensack MM, Jiang W, Zhu Z, Lewis MR, McGinley JN, Brick MA, Thompson HJ. (2011) Cell Signaling Pathways Associated with a Reduction in Mammary Cancer Burden by Dietary Common Bean (Phaseolus vulgaris, L.). Carcinogenesis.Nov 9. [Epub ahead of print] 2010 Mensack MM, Fitzgerald VK, Ryan EP, Lewis MR, Thompson HJ, Brick MA (2010) Evaluation of diversity among common beans (Phaseolus vulgaris L.) from two centers of domestication using ‘omics’ technologies.BMC Genomics. Dec 2, 2010;11(1):686. Mensack MM, Fitzgerald VK, Lewis MR, Thompson HJ. (2010) Characterization of Low Molecular Weight Chemical Fractions of Dry Bean (Phaseolus vulgaris) for Bioactivity Using Caenorhabditis elegans Longevity and Metabolite Fingerprinting. J Agric Food Chem. May 10, 2010. 2009 Fitzgerald VK, Mensack MM, Wolfe P, Thompson HJ, (2009) A transfer-less, multi-well liquid culture feeding system for screening small molecules that affect the longevity of Caenorhabditis elegans. BioTechniques. Dec;47(6):ix–xv Thompson MD, Thompson HJ, McGinley JN, Neil ES, Rush DK, Holm DG, Stushnoff C, (2009) Functional food characteristics of potato cultivars (Solanum tuberosum L.): Phytochemical composition and inhibition of 1-methyl-1-nitrosourea induced breast cancer in rats. J. Food Compos. Anal. 22(6): 571-576 Thompson MD, Stushnoff C, McGinley JN, Thompson HJ. (2009) In vitro measures used to predict anticancer activity of apple cultivars and their comparison to outcomes from a rat model of experimentally induced breast cancer. Nutr Cancer. 61(4):510-7. Thompson MD, Thompson HJ. (2009) Biomedical Agriculture: A systemic approach to food crop improvement for chronic disease prevention. Advances in Agronomy 102:1-54 Thompson MD, Brick MA, McGinley JN, Thompson HJ. (2009) Chemical Composition and Mammary Cancer Inhibitory Activity of Dry Bean. Crop Sci. 49:179–186 2008 Stushnoff C, Holm D, Thompson MD, Jiang W, Thompson HJ, Joyce NI, Wilson P. (2008) Antioxidant properties of cultivars and selections from the Colorado potato breeding program. Am. J. Pot Res 85:267–276 Thompson MD, Thompson HJ, Brick MA, McGinley JN, Jiang W, Zhu Z, Wolfe P. (2008) Mechanisms associated with dose-dependent inhibition of rat mammary carcinogenesis by dry bean (Phaseolus vulgaris, L.). J Nutr. 2008 Nov;138(11):2091-7 2006 Thompson HJ, Heimendinger J, Diker A, O’Neill C, Haegele A, Meinecke B, Wolfe P, Sedlacek S, Zhu Z, Jiang W. (2006) Dietary Botanical Diversity Affects the Reduction of Oxidative Biomarkers in Women due to High Vegetable and Fruit Intake. J Nutr. Aug;136(8):2207-12 2005 Thompson HJ, Heimendinger J, Gillette C, Sedlacek SM, Haegele A, O’neill C, Wolfe P. (2005) In vivo investigation of changes in biomarkers of oxidative stress induced by plant food rich diets. J. Agric Food Chem. 27;53(15):6126-32. Thompson HJ, Heimendinger J, Sedlacek S, Haegele A, Diker A, O’Neill C, Meinecke B, Wolfe P, Zhu Z, Jiang W. (2005) 8-Isoprostane F2alpha excretion is reduced in women by increased vegetable and fruit intake. Am J Clin Nutr. Oct;82(4):768-76. 2004 E. Brigitte Gottschall, Pam Wolfe, Albert D. Haegele, Zongjian Zhu, Cecile S. Rose, Tricia Sells, and Henry J. Thompson (2004) Increased Urinary 8-Isoprostaglandin F2 Is Associated With Lower Plasma Selenium Levels and Lower Vegetable and Fruit Intake in an Asbestos-Exposed Cohort at Risk for Lung Cancer. May;125(5 Suppl):83S 1999 Thompson,H.J., Heimendinger,J., Haegele,A., Sedlacek,S.M., Gillette,C., O’Neill,C., Wolfe,P., and Conry,C. (1999) Effect of increased vegetable and fruit consumption on markers of oxidative cellular damage. Carcinogenesis, 20, 2261-2266.