All Publications for Stephen Coleman

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Impact of Cell Culture and Copper Dose on Gene Expression in Bovine Liver, Nicole Mary-Belle Tillquist,Meghan Paige Thorndyke,Tyler Thomas,Stephen John Coleman,Terry E Engle

Impact of cell culture and copper dose on copper trafficking genes in bovine liver, Nicole Mary-Belle Tillquist,Meghan Paige Thorndyke,Tyler Thomas,Stephen John Coleman,Terry E Engle

Comparison of an antioxidant source and antioxidant plus BCAA on athletic performance and post exercise recovery of horses. , Colorado State University, Emily Kent,Renan Regatieri Casagrande,Christine Levihn,Grace Romo,Stephen Coleman,Kevin Herkelman,Tanja Hess,

Genome-wide association studies of beef cow terrain-use traits using Bayesian multiple-SNP regression., Courtney F Pierce,Scott E Speidel,Stephen John Coleman,R Mark Enns,Derek W Bailey,Juan F Medrano,A Canovas,Paul Meiman,Larry D Howery,Walter F Mandeville,Milt Thomas

Investigating the influence of exogenous copper supplementation on copper homeostasis in beef cattle liver., Nicole Mary-Belle Tillquist,Stephen John Coleman,Terry E Engle

MicroRNA delivered to stallion spermatozoa: Epididymosomes transfer microRNAs from epididymal epithelium to equine spermatozoa., Hannah Twenter,Kristin M Klohonatz,Kelly Davis,Luke Daniel Bass,Stephen John Coleman,Gerrit J Bouma,Jason Bruemmer

Next-Generation Sequencing in Equine Genomics , Stephen John Coleman,Jessica L Petersen

Effects of Corn Supplementation on Serum and Muscle MicroRNA Profiles Within Horses, Clarissa Margaret Carver,Tanja Hess,Jason Bruemmer,Stephen John Coleman,Gabriele A Landolt

The pelvic flexure separates distinct microbial communities in the equine hindgut, Kailee Janelle Reed,Isabelle G Kunz,Jessica S Scare,Martin K Nielsen,Philip James Turk,Robert J Coleman,Stephen John Coleman

Differential expression and validation of calcium-related genes in association with pulmonary hypertension in Angus steers raised at high altitude., Natalie Faye Crawford,Kaysie Jennings,A R Canovas,Juan F MEdrano,Alma Islas-Trejo,R D Brown,Stephen John Coleman,Scott E Speidel,R Mark Enns,Kurt R ,Milt Thomas

Gene expression profiling of the pelvic flexure and surrounding large colon in the equine gastrointestinal tract by RNA-sequencing., L Wilson,Kaysie Jennings,Stephen John Coleman

Genes regulating calcium availability and utilization in Angus steers may be useful in identifying cattle with reduced susceptibility to pulmonary hypertension in high altitude beef production systems., Natalie Faye Crawford,Kaysie Jennings,Angela Canovas,Juan F. Medrano,A. Islas-Trejo,R. D. Brown,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,Kurt R. Stenmark,Milt Thomas

Genome-Wide Association Studies of Beef Cow Terrain-Use Traits Using Bayesian Multiple-SNP Regression, C.F. Pierce,Scott E Speidel,Stephen John Coleman,Mark Mark Enns,D.W. Bailey,J.F. Medrano, C\'anovas, A.,P.J. Meiman,L.D. Howery,W.F. Mandeville,Milt Thomas

Genome-wide association studies of beef cow terrain-use traits using Bayesian multiple-SNP regression, Courtney Fay Pierce,Scott E Speidel,Stephen John Coleman,Mark Mark Enns,Derek Bailey,Juan Medrano,Angela Canovas,Paul Meiman,Larry Howery,Walter F. Mandeville,Milt Thomas

Characterizing the impact of altitude and finishing system on mean pulmonary arterial pressure and carcass characteristics in Angus cattle, K.J. Jennings,G.M. Krafsur,R.D. Brown,Timothy N Holt,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,K.R. Stenmark,Milt Thomas

Effects of corn supplementation on muscle microRNA profiles within horses, Colorado State University, Clarissa Carver,Tanja Hess,Jason Bruemmer,Stephen Coleman,Gabiriele Landolt

Equine fecal microbiota changes associated with anthelmintic administration, Isabelle G Kunz,Kailee Janelle Reed,Jess Lynne Metcalf,Diana M Hassel,Robert J Coleman,Tanja Hess,Stephen John Coleman

Characterizing the impact of altitude and finishing system on mean pulmonary arterial pressure and carcass characteristics in Angus cattle., Kaysie Jennings,Greta M Krafsur,R D Brown,Timothy N Holt,Stephen John Coleman,Scott E Speidel,R M Enns,K R Stenmark,Milt Thomas

Non-Coding RNA Sequencing of Equine Endometrium During Maternal Recognition of Pregnancy., Kristin Marie Klohonatz,Stephen John Coleman,A D Cameron,Ann Marie Hess,Kailee Janelle Reed,A Canovas,J F Medrano,A D Islas-Trejo,T Kalbfleisch,Gerrit J Bouma,Jason Bruemmer

Coding RNA Sequencing of Equine Endometrium during Maternal Recognition of Pregnancy., Kristin Marie Klohonatz,Stephen John Coleman,A D Islas-Trejo,J F Medrano,Ann Marie Hess,T Kalbfleisch,Milt Thomas,Gerrit J Bouma,Jason Bruemmer

Transfer of microRNAs from epididymal epithelium to equine spermatozoa., Colorado State University, H Twenter,K Klohonatz,K Davis,L Bass,Stephen John Coleman,Gerrit J Bouma,Jason E Bruemmer

Evaluation of Equine Endometrium during Maternal Recognition of Pregnancy Utilizing RNA Sequencing, Kristin Marie Klohonatz,Alma D Islas-Trejo,Juan F Medrano,Ann Marie Hess,Stephen John Coleman,Milt Thomas,Gerrit J Bouma,Jason Bruemmer

Allele distribution and testing for association between an oxygen dependent degradation domain SNP in EPAS1 and pulmonary arterial pressures in yearling Angus cattle, Natalie Faye Crawford,Stephen John Coleman,Timothy N Holt,Scott E Speidel,Mark Mark Enns,R Hamid,Milt Thomas

Pathway analyses revealed up-regulation of calcium-dependent genes in the cardiac right ventricle of Angus steers fed at high altitude, Natalie Faye Crawford,Stephen John Coleman,Mark Mark Enns,Scott E Speidel,Franklyn B Garry,Timothy N Holt,Milt Thomas

Pulmonary hypertension in Angus steers: influence of finishing systems and altitudes, Kaysie Jennings,Greta M Krafsur,D Brown,Timothy N Holt,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,K Stenmark,Milt Thomas

Validation of Quantitative Trait Loci Associated with Grazing Distribution Traits in Beef Cattle Using Bayes C, Courtney Fay Pierce,D Bailey,J Medrano,A Cánovas,Scott E Speidel,Stephen John Coleman,Mark Mark Enns,Milt Thomas

Characteristics of grazing distribution traits in beef cattle for genotype-phenotype associations, Courtney Fay Pierce,D.W. Bailey,J.F. Medrano,A. Cánovas,Scott E Speidel,Stephen John Coleman,Mark Mark Enns,Milt Thomas

Studying grazing distribution of beef cattle using DNA technology, Courtney Fay Pierce,M.M. Barbero,D.W. Bailey,J.F. Medrano,A. Cánovas,Scott E Speidel,Stephen John Coleman,Mark Mark Enns,Milt Thomas

Summary Breeding and Genetics: genetic study of adaptability of beef cattle to altitude, Milt Thomas,Timothy N Holt,Mark Mark Enns,Scott E Speidel,Stephen John Coleman,Randie Marguerite Culbertson,Kaysie Jennings,Greta M Krafsur,Natalie Faye Crawford,B.C. Krehbiel

Construction of an association weight matrix to identify SNP that play a role in performance of Angus cattle at higher elevations, K.J. Jennings,Xi Zeng,A. Reverter,T.N. Holt,Stephen John Coleman,R.M. Enns,Scott E Speidel,Milt Thomas

Genotyping a SNP in the endothelial PAS domaincontaining protein 1 (EPAS1) gene: is it associated with mean pulmonary arterial pressures in yearling Angus cattle?, Natalie Faye Crawford,Stephen John Coleman,T.N. Holt,Scott E Speidel,R.M. Enns,J.H. Newman,R. Hamid,Milt Thomas

SNP discovery for QTL associated with grazing distribution in Angus cattle using RNA-Seq, C.F. Pierce,M.M. Dias,D.W. Bailey,J.F. Medrano,A Canovas,Scott E Speidel,Stephen John Coleman,R.M. Enns,Milt Thomas

Large RNA sequencing of equine endometrium during maternal recognition of pregnancy, Kristin Marie Klohonatz,A Canovas,Juan Medrano,Alma Islas-Trejo,Ann Marie Hess,Stephen John Coleman,Milt Thomas,Gerrit J Bouma,Jason Bruemmer

SNP detection using RNA-sequences of candidate genes associated with puberty in cattle, Marina M Dias,Angela Canovas,C. Mantilla-Rojas,David G Riley,Pablo Luna-Nevarez,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,A Islas-Trejo,Juan F Medrano,Steve Moore,Marina Fortes,Loan T. Nguyen,B. Venus,Iara Diaz,F. Souza,L Albuquerque,Milt Thomas,H. Oliveria

SNP detection using RNA-sequences of candidate genes associated with puberty in cattle., M M Dias,A Cánovas,C Mantilla-Rojas,D G Riley,P Luna-Nevarez,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,A Islas-Trejo,J F Medrano,S S Moore,M R Fortes,L T Nguyen,B Venus,I S Diaz,F R Souza,L F Fonseca,F Baldi,L G Albuquerque,Milt Thomas,H N Oliveira

SNP detection using RNA-sequences of candidate genes associated with puberty in cattle, M.M. Dias,A. Cánovas,C. Mantilla-Rojas,D.G. Riley,P. Luna-Nevarez,Stephen John Coleman,Scott E Speidel,R.M. Enns,A. Islas-Trejo,J.F. Medrano,Milt Thomas

Multi-omics data resources and use in genetic improvement of cattle growth and health, Milt Thomas,Stephen John Coleman,Scott E Speidel,Mark Mark Enns

Pulmonary arterial pressure in yearling Angus cattle managed at high altitude: Study of a non-synonymous SNP in the oxygen-dependent degradation domain of the endothelial PAS domain-containing protein 1 gene, Natalie Faye Crawford,Xi Zeng,Stephen John Coleman,Timothy N Holt,Scott E Speidel,Mark Mark Enns,John Newman,R. Hamid,Milt Thomas

SNP discovery in RNA-Seq across breeds of cattle in puberty-related candidate genes (i.e., network hubs), M. M. Dias,Milt Thomas,A. Canovas,C. Mantilla-Rojas,D. Riley,P. Luna,Stephen John Coleman,Scott E Speidel,Mark Mark Enns,A. Ilas-Trejo,J. F. Medrano,Rebecca Cockrum,K. M. Cammack,K. R. Stenmark,S. Moore,M. R. S. Fortes,L.T Nguyen,B. Venus,I. Diaz,F. Souza,L. Fonseca,F. Baldi,L. Albuquerque,H. Oliveira

RNA Sequencing of equine endometrium during maternal recognition of pregnancy, Kristin Marie Klohonatz,Angela Canovas,Juan F Medrano,Ann Marie Hess,Stephen John Coleman,Milt Thomas,Gerrit J Bouma,Jason Bruemmer

Tissue Restricted Splice Junctions Originate Not Only from Tissue-Specific Gene Loci, but Gene Loci with a Broad Pattern of Expression., M S Hestand,Z Zeng,Stephen John Coleman,J Liu,J N MacLeod

Annotation of the Protein Coding Regions of the Equine Genome., M S Hestand,T S Kalbfleisch,Stephen John Coleman,Z Zeng,J Liu,L Orlando,J N MacLeod

Comparison of the Equine Reference Sequence with Its Sanger Source Data and New Illumina Reads., J Rebolledo-Mendez,M S Hestand,Stephen John Coleman,Z Zeng,L Orlando,J N MacLeod,T Kalbfleisch

Determinants and implications of mRNA poly(A) tail size--does this protein make my tail look big?, Aimee Lynne Jalkanen,Stephen John Coleman,Jeffrey Wilusz

Analysis of unannotated equine transcripts identified by mRNA sequencing., Stephen John Coleman,Z Zeng,M S Hestand,J Liu,J N Macleod

Genome-wide association study among four horse breeds identifies a common haplotype associated with in vitro CD3+ T cell susceptibility/resistance to equine arteritis virus infection., Y Y Go,E Bailey,D G Cook,Stephen John Coleman,J N Macleod,K C Chen,P J Timoney,U B Balasuriya

Brother of CDO (BOC) expression in equine articular cartilage., K S Vanderman,M Tremblay,W Zhu,M Shimojo,M J Mienaltowski,Stephen John Coleman,J N MacLeod

Structural annotation of equine protein-coding genes determined by mRNA sequencing., Stephen John Coleman,Z Zeng,K Wang,S Luo,I Khrebtukova,M J Mienaltowski,G P Schroth,J Liu,J N MacLeod

MapSplice: accurate mapping of RNA-seq reads for splice junction discovery., K Wang,D Singh,Z Zeng,Stephen John Coleman,Y Huang,G L Savich,X He,P Mieczkowski,S A Grimm,C M Perou,J N MacLeod,D Y Chiang,J F Prins,J Liu

Genome sequence, comparative analysis, and population genetics of the domestic horse., C M Wade,E Giulotto,S Sigurdsson,M Zoli,S Gnerre,F Imsland,T L Lear,D L Adelson,E Bailey,R R Bellone,H Blöcker,O Distl,R C Edgar,M Garber,T Leeb,E Mauceli,J N MacLeod,M C Penedo,J M Raison,T Sharpe,J Vogel,L Andersson,D F Antczak,T Biagi,M M Binns,B P Chowdhary,Stephen John Coleman,G Della Valle,S Fryc,G Guérin,T Hasegawa,E W Hill,J Jurka,A Kiialainen,G Lindgren,J Liu,E Magnani,J R Mickelson,J Murray,S G Nergadze,R Onofrio,S Pedroni,M F Piras,T Raudsepp,M Rocchi,K H Røed,O A Ryder,S Searle,L Skow,J E Swinburne,A C Syvänen,T Tozaki,S J Valberg,M Vaudin,J R White,M C Zody,E S Lander,K Lindblad-Toh

Characterization of equine and other vertebrate TLR3, TLR7, and TLR8 genes., N M Astakhova,A A Perelygin,A A Zharkikh,T L Lear,Stephen John Coleman,J N MacLeod,M A Brinton

Evaluation of Compass as a comparative mapping tool for ESTs using horse radiation hybrid maps., Stephen John Coleman,G Gong,D P Gaile,B P Chowdhary,E Bailey,L Liu,J N MacLeod